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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_22491831_22492916_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22491831 - 22492916

Intron Length:

1086

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTGTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATGCAT

U12 Branch Point Sequence:

TTTTTTTTTTCT

Flanking Amino Acid:

CLHCEKTLQQDDCRVVLAKQ

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

74.8

38.1

Major BPS

58.4

0.21

1.3

69.4

37.7

Major PPT

84.9

0.78

0.8

85.4

29.4

Minor 5ss

34.2

-1.8

2.8

40.6

45.6

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

TRIM23

Ensembl Gene ID:

ENSAPLG00000009065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009453

22488180 - 22504953

16774