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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_22512360_22513173_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22512360 - 22513173

Intron Length:

814

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAACG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTATCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATCA

Flanking Amino Acid:

GEMLTLPQNFGNIFLGETFS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

41.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.7

0.87

0.7

84.6

28.6

Minor 5ss

33.4

-1.9

2.8

33.9

Minor BPS

71.9

0.68

1.5

82.41

32.7

Associated Gene:

Gene:

TRAPPC13

Ensembl Gene ID:

ENSAPLG00000014926

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025447

22504974 - 22528823

23850

ENSAPLT00000015586

22504974 - 22528823

23850

ENSAPLT00000044069

22506915 - 22528595

21681