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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_22520382_22522566_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22520382 - 22522566

Intron Length:

2185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAATTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATGATTT

Flanking Amino Acid:

YNAESDLSSVTDEVFLEAQI

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

82.5

30.8

Major BPS

100

1.24

0.5

100

Major PPT

89.6

0.89

0.7

87.9

29.4

Minor 5ss

46.3

-0.4

2.8

64.2

42.3

Minor BPS

56.5

0.28

82.31

38.9

Associated Gene:

Gene:

TRAPPC13

Ensembl Gene ID:

ENSAPLG00000014926

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044069

22506915 - 22528595

21681

ENSAPLT00000025447

22504974 - 22528823

23850