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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_22525335_22527269_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22525335 - 22527269

Intron Length:

1935

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TGTACCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

ATTCTTGTACCT

Flanking Amino Acid:

RLQTSQLQRMAPGYGDVRLS

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

Major BPS

73.8

0.59

0.9

26.8

Major PPT

71.7

0.49

0.9

62.3

39.6

Minor 5ss

40.3

-1.1

3.1

56.2

42.2

Minor BPS

46.8

-0.1

2.2

70.72

40.8

Associated Gene:

Gene:

TRAPPC13

Ensembl Gene ID:

ENSAPLG00000014926

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015586

22504974 - 22528823

23850

ENSAPLT00000044069

22506915 - 22528595

21681

ENSAPLT00000025447

22504974 - 22528823

23850