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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_22527371_22528249_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22527371 - 22528249

Intron Length:

879

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGATG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTAGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGTTTAT

U12 Branch Point Sequence:

TTTTCTCTAGCA

Flanking Amino Acid:

FDITCKITNCSERTMDLVLE

Intron Amino Acid Position:

327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

75.3

40.4

Major BPS

63.5

0.34

1.4

57.4

49.1

Major PPT

0.79

0.8

82.3

Minor 5ss

35.9

-1.6

3.2

48.4

47.4

Minor BPS

62.5

0.39

1.9

80.12

35.8

Associated Gene:

Gene:

TRAPPC13

Ensembl Gene ID:

ENSAPLG00000014926

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025447

22504974 - 22528823

23850

ENSAPLT00000015586

22504974 - 22528823

23850

ENSAPLT00000044069

22506915 - 22528595

21681