Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_22536124_22536210_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22536124 - 22536210

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTTAG

5'SS Class:

major

3'SS Sequence:

TACTTGTTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

CGATTTTTACTT

Flanking Amino Acid:

EQKLRDMSSPTGTGLSFDMA

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

1.1

68.3

39.3

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

0.65

0.8

77.1

36.8

Minor 5ss

42.5

-0.8

2.9

59.1

45.3

Minor BPS

51.4

0.12

1.6

64.21

41.1

Associated Gene:

Gene:

SGTB

Ensembl Gene ID:

ENSAPLG00000029083

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034950

22532617 - 22550863

18247