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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_22541089_22550759_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
22541089 - 22550759

Intron Length:
9671

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAA|GTGATGAAG

5'SS Class:
major

3'SS Sequence:
AACTTGAGTGCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTAAC

U12 Branch Point Sequence:
GACTTATTAACT

Flanking Amino Acid:
TPDEQESLEGNQPGLVAVYS

Intron Amino Acid Position:
35

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
65.3
0.36
1.1
61.3
38.9

Major BPS
81.9
0.79
0.8
81.9
25

Major PPT
62.3
0.28
1.1
55.1
43.8

Minor 5ss
27.9
-2.5
3
30.9
36.6

Minor BPS
63.1
0.49
1.6
74.91
41.4

Associated Gene:

Gene:
SGTB

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22532617 - 22550863
18247