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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_22552198_22563529_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22552198 - 22563529

Intron Length:

11332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCGCC

5'SS Class:

major

3'SS Sequence:

TTTCTCATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTTTCTCATTT

Flanking Amino Acid:

MLALCAARRSIGPRLVLR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

68.2

38.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

87.9

0.85

0.7

85.8

Minor 5ss

36.2

-1.6

3.5

50.4

46.4

Minor BPS

62.3

0.47

1.8

83.64

37.8

Associated Gene:

Gene:

NLN

Ensembl Gene ID:

ENSAPLG00000001243

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030343

22552172 - 22584023

31852

ENSAPLT00000022995

22552172 - 22615401

63230

ENSAPLT00000001407

22552172 - 22778894

226723

ENSAPLT00000047866

22552172 - 22615401

63230

ENSAPLT00000041243

22552172 - 22588579

36408