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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_22563787_22565994_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22563787 - 22565994

Intron Length:

2208

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTAAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

TTTTATTTAAAC

Flanking Amino Acid:

ALADIEVEYAVERSMLDFPQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

1.1

76.2

32.9

Major BPS

79.5

0.73

0.9

36.9

Major PPT

77.1

0.61

74.2

39.3

Minor 5ss

29.3

-2.4

2.9

33.7

41.5

Minor BPS

70.3

0.62

1.5

80.76

33.2

Associated Gene:

Gene:

NLN

Ensembl Gene ID:

ENSAPLG00000001243

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030343

22552172 - 22584023

31852

ENSAPLT00000022995

22552172 - 22615401

63230

ENSAPLT00000001407

22552172 - 22778894

226723

ENSAPLT00000047866

22552172 - 22615401

63230

ENSAPLT00000041243

22552172 - 22588579

36408