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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_22573086_22574308_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22573086 - 22574308

Intron Length:

1223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

ACTTCATAAACT

Flanking Amino Acid:

ESAFNTRCKEENTKILQQLL

Intron Amino Acid Position:

269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

79.7

35.4

Major BPS

78.6

0.71

79.6

32.9

Major PPT

92.2

0.95

0.5

92.5

17.5

Minor 5ss

-0.9

2.9

58.1

46.5

Minor BPS

60.6

0.41

79.5

42.4

Associated Gene:

Gene:

NLN

Ensembl Gene ID:

ENSAPLG00000001243

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030343

22552172 - 22584023

31852

ENSAPLT00000022995

22552172 - 22615401

63230

ENSAPLT00000001407

22552172 - 22778894

226723

ENSAPLT00000047866

22552172 - 22615401

63230

ENSAPLT00000041243

22552172 - 22588579

36408