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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_22574445_22576767_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22574445 - 22576767

Intron Length:

2323

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTTTGTTCT

5'SS Class:

major

3'SS Sequence:

ATCTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTGAT

U12 Branch Point Sequence:

GTTGATTCAAAG

Flanking Amino Acid:

KSTDNVTTFLDDLSKKLKPL

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

75.3

Major BPS

72.4

0.56

1.1

63.1

44.4

Major PPT

89.8

0.9

0.7

88.4

Minor 5ss

45.3

-0.5

2.4

60.2

44.2

Minor BPS

44.4

-0.5

1.9

50.71

43.1

Associated Gene:

Gene:

NLN

Ensembl Gene ID:

ENSAPLG00000001243

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030343

22552172 - 22584023

31852

ENSAPLT00000022995

22552172 - 22615401

63230

ENSAPLT00000001407

22552172 - 22778894

226723

ENSAPLT00000047866

22552172 - 22615401

63230

ENSAPLT00000041243

22552172 - 22588579

36408