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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_22577135_22578513_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22577135 - 22578513

Intron Length:

1379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTATC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTGTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

ATTTTCTGATAT

Flanking Amino Acid:

LGQFYLDLYPREGKYGHAAC

Intron Amino Acid Position:

436

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

87.2

27.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

87.7

0.85

0.8

84.5

30.4

Minor 5ss

40.4

-1.1

2.8

54.5

42.7

Minor BPS

54.2

0.21

1.8

76.47

39.7

Associated Gene:

Gene:

NLN

Ensembl Gene ID:

ENSAPLG00000001243

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041243

22552172 - 22588579

36408

ENSAPLT00000030343

22552172 - 22584023

31852

ENSAPLT00000022995

22552172 - 22615401

63230

ENSAPLT00000001407

22552172 - 22778894

226723

ENSAPLT00000047866

22552172 - 22615401

63230