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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_22584024_22778837_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22584024 - 22778837

Intron Length:

194814

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTCAGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

AGCATCTAAATT

Flanking Amino Acid:

FKEEGIMNPKAGIVKHSFKI

Intron Amino Acid Position:

655

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

76.4

39.6

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

63.4

0.3

1.2

65.4

40.2

Minor 5ss

33.3

-1.9

3.5

49.7

46.5

Minor BPS

49.5

0.04

1.7

63.04

41.6

Associated Gene:

Gene:

NLN

Ensembl Gene ID:

ENSAPLG00000001243

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001407

22552172 - 22778894

226723