About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_22715228_22715588_F

Intron Information:

Intron Rank:
12
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
22715228 - 22715588
Intron Length:
361

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAG|GTATGTTTG
5'SS Class:
strong_major
3'SS Sequence:
TTTTTTTTTCCAG|A
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
AATTAAT
U12 Branch Point Sequence:
AGTGAATTAATT
Flanking Amino Acid:
HNFLTQLPPEIGNWKYVTVL
Intron Amino Acid Position:
341

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
88.6
0.91
0.8
80.5
35
Major BPS
83
0.82
0.8
82
24.9
Major PPT
98.2
1.08
0.5
92.3
26.6
Minor 5ss
49.9
-0
2.4
66.4
45.1
Minor BPS
49.9
0.07
1.9
69.57
41.1

Associated Gene:

Gene:
ERBIN
Ensembl Gene ID:
ENSAPLG00000002753
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000043619
22646503 - 22742210
95708
ENSAPLT00000002853
22646503 - 22742210
95708
ENSAPLT00000044861
22646503 - 22742389
95887