Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_22834092_22836912_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22834092 - 22836912

Intron Length:

2821

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGTTC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTACCCTGAAAT

Flanking Amino Acid:

GRRSVRLKWEVMQSENILGY

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

75.8

34.6

Major BPS

71.2

0.53

70.3

31.9

Major PPT

83.6

0.76

0.7

76.9

31.8

Minor 5ss

41.4

-1

3.3

58.9

45.9

Minor BPS

65.4

0.56

1.6

81.49

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019269

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024173

22817072 - 22854871

37800