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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23000250_23015647_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

23000250 - 23015647

Intron Length:

15398

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

CTTAACTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TCTTTCTTAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.6

34.9

Major BPS

89.7

0.98

0.7

89.9

Major PPT

69.9

0.45

64.7

Minor 5ss

38.5

-1.3

2.9

46.1

43.6

Minor BPS

87.9

1.27

0.9

95.32

31.5

Associated Gene:

Gene:

MAST4

Ensembl Gene ID:

ENSAPLG00000020182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035376

22940434 - 23240930

300497

ENSAPLT00000032575

22999545 - 23238700

239156

ENSAPLT00000032119

22940434 - 23238700

298267

ENSAPLT00000019142

22999545 - 23238700

239156

ENSAPLT00000045179

22940434 - 23236373

295940