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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23035162_23077047_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23035162 - 23077047

Intron Length:

41886

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGCG

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTATTCTTAATG

Flanking Amino Acid:

PGLLRRRGLQKELSLPRRGS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

62.3

41.3

Major BPS

0.92

0.9

86.2

29.1

Major PPT

95.8

1.03

0.5

92.1

18.3

Minor 5ss

28.5

-2.5

3.6

38.6

46.6

Minor BPS

77.4

0.72

1.2

75.74

36.2

Associated Gene:

Gene:

MAST4

Ensembl Gene ID:

ENSAPLG00000020182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004141

23035063 - 23236373

201311