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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23112100_23163355_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23112100 - 23163355

Intron Length:

51256

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGCCTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTGCCTACAG

Flanking Amino Acid:

CSPLFAFHFWSCRTSNRKSL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

72.3

39.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

86.8

0.83

0.8

80.9

31.3

Minor 5ss

35.7

-1.6

3.3

45.9

49.3

Minor BPS

44.8

-0.5

2.4

61.25

46.2

Associated Gene:

Gene:

MAST4

Ensembl Gene ID:

ENSAPLG00000020182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017740

23111963 - 23238700

126738

ENSAPLT00000045179

22940434 - 23236373

295940

ENSAPLT00000027183

23106396 - 23236373

129978