Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23177066 - 23184044

Intron Length:

6979

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTATC

5'SS Class:

major

3'SS Sequence:

TCTGCTCTTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TCTGATAGAAGC

Flanking Amino Acid:

GTNTPSSTVSSSCSSQEKLH

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

78.6

35.6

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

78.6

0.64

0.8

73.4

31.5

Minor 5ss

43.2

-0.7

2.9

64.8

39.3

Minor BPS

38.8

-0.8

48.54

41.5

Associated Gene:

Gene:

MAST4

Ensembl Gene ID:

ENSAPLG00000020182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019142

22999545 - 23238700

239156

ENSAPLT00000032575

22999545 - 23238700

239156

ENSAPLT00000017740

23111963 - 23238700

126738

ENSAPLT00000032119

22940434 - 23238700

298267

ENSAPLT00000045179

22940434 - 23236373

295940

ENSAPLT00000004141

23035063 - 23236373

201311

ENSAPLT00000031225

23130837 - 23238700

107864

ENSAPLT00000035376

22940434 - 23240930

300497

ENSAPLT00000027183

23106396 - 23236373

129978

ENSAPLT00000035260

23035063 - 23238700

203638

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23177066_23184044_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: