Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23184203 - 23185408

Intron Length:

1206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

GCTTTGCTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAA

U12 Branch Point Sequence:

ACAAGTTTAAAG

Flanking Amino Acid:

TAMRPRSRSLSPGRSPACCD

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.7

26.6

Major BPS

72.6

0.56

1.2

75.9

36.3

Major PPT

79.7

0.67

0.9

72.9

37.4

Minor 5ss

-1.6

2.8

44.6

43.4

Minor BPS

44.7

-0.5

1.9

44.37

41.4

Associated Gene:

Gene:

MAST4

Ensembl Gene ID:

ENSAPLG00000020182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027183

23106396 - 23236373

129978

ENSAPLT00000035260

23035063 - 23238700

203638

ENSAPLT00000019142

22999545 - 23238700

239156

ENSAPLT00000032575

22999545 - 23238700

239156

ENSAPLT00000017740

23111963 - 23238700

126738

ENSAPLT00000032119

22940434 - 23238700

298267

ENSAPLT00000045179

22940434 - 23236373

295940

ENSAPLT00000004141

23035063 - 23236373

201311

ENSAPLT00000031225

23130837 - 23238700

107864

ENSAPLT00000035376

22940434 - 23240930

300497

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23184203_23185408_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: