Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23185485 - 23186881

Intron Length:

1397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGAAT

5'SS Class:

strong_major

3'SS Sequence:

CACTTGTATATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

ATGTATTCACTT

Flanking Amino Acid:

NHVYKERFPKATAQMEERLQ

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

80.6

33.5

Major BPS

85.7

0.89

0.8

22.2

Major PPT

0.38

61.2

Minor 5ss

-1.8

3.2

48.4

47.4

Minor BPS

45.6

-0.2

1.9

63.11

41.7

Associated Gene:

Gene:

MAST4

Ensembl Gene ID:

ENSAPLG00000020182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027183

23106396 - 23236373

129978

ENSAPLT00000035260

23035063 - 23238700

203638

ENSAPLT00000019142

22999545 - 23238700

239156

ENSAPLT00000032575

22999545 - 23238700

239156

ENSAPLT00000017740

23111963 - 23238700

126738

ENSAPLT00000032119

22940434 - 23238700

298267

ENSAPLT00000045179

22940434 - 23236373

295940

ENSAPLT00000004141

23035063 - 23236373

201311

ENSAPLT00000031225

23130837 - 23238700

107864

ENSAPLT00000035376

22940434 - 23240930

300497

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23185485_23186881_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: