Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23187092 - 23189972

Intron Length:

2881

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTCAATTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TTTTGTTTAATT

Flanking Amino Acid:

QQKLDKLLQEAQERSESGEL

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

74.3

34.2

Major BPS

81.8

0.79

1.1

34.5

Major PPT

78.2

0.63

0.9

73.9

40.3

Minor 5ss

39.2

-1.2

3.4

56.9

47.4

Minor BPS

74.8

0.86

1.7

91.31

32.6

Associated Gene:

Gene:

MAST4

Ensembl Gene ID:

ENSAPLG00000020182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027183

23106396 - 23236373

129978

ENSAPLT00000035260

23035063 - 23238700

203638

ENSAPLT00000019142

22999545 - 23238700

239156

ENSAPLT00000032575

22999545 - 23238700

239156

ENSAPLT00000017740

23111963 - 23238700

126738

ENSAPLT00000032119

22940434 - 23238700

298267

ENSAPLT00000045179

22940434 - 23236373

295940

ENSAPLT00000004141

23035063 - 23236373

201311

ENSAPLT00000031225

23130837 - 23238700

107864

ENSAPLT00000035376

22940434 - 23240930

300497

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23187092_23189972_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: