Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23190075 - 23195344

Intron Length:

5270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATGAT

U12 Branch Point Sequence:

ATGATGATGATT

Flanking Amino Acid:

ARPARLLECLEFDPEEFYYL

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

68.4

Major BPS

69.5

0.48

1.2

59.7

46.7

Major PPT

95.5

1.02

0.5

88.9

28.1

Minor 5ss

36.2

-1.6

3.3

43.9

45.7

Minor BPS

-0.6

2.2

57.93

39.4

Associated Gene:

Gene:

MAST4

Ensembl Gene ID:

ENSAPLG00000020182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027183

23106396 - 23236373

129978

ENSAPLT00000035260

23035063 - 23238700

203638

ENSAPLT00000019142

22999545 - 23238700

239156

ENSAPLT00000032575

22999545 - 23238700

239156

ENSAPLT00000017740

23111963 - 23238700

126738

ENSAPLT00000032119

22940434 - 23238700

298267

ENSAPLT00000045179

22940434 - 23236373

295940

ENSAPLT00000004141

23035063 - 23236373

201311

ENSAPLT00000031225

23130837 - 23238700

107864

ENSAPLT00000035376

22940434 - 23240930

300497

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23190075_23195344_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: