Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23195478 - 23199702

Intron Length:

4225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGCTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TGTATTCTAATC

Flanking Amino Acid:

QLGLNKDPLEEIAQLANCDS

Intron Amino Acid Position:

350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.6

1.07

0.7

84.1

26.6

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

81.2

0.7

0.8

73.5

37.1

Minor 5ss

-1.9

3.1

41.6

Minor BPS

51.5

0.03

1.6

63.98

35.5

Associated Gene:

Gene:

MAST4

Ensembl Gene ID:

ENSAPLG00000020182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027183

23106396 - 23236373

129978

ENSAPLT00000035260

23035063 - 23238700

203638

ENSAPLT00000019142

22999545 - 23238700

239156

ENSAPLT00000032575

22999545 - 23238700

239156

ENSAPLT00000017740

23111963 - 23238700

126738

ENSAPLT00000032119

22940434 - 23238700

298267

ENSAPLT00000045179

22940434 - 23236373

295940

ENSAPLT00000004141

23035063 - 23236373

201311

ENSAPLT00000031225

23130837 - 23238700

107864

ENSAPLT00000035376

22940434 - 23240930

300497

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23195478_23199702_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: