Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23199771 - 23202146

Intron Length:

2376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TTTTACTTTGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

TTCTCTTTTACT

Flanking Amino Acid:

ETLEMDESISTSNTSLQLRR

Intron Amino Acid Position:

373

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

80.8

34.4

Major BPS

76.8

0.67

0.9

75.9

Major PPT

78.6

0.64

79.7

32.3

Minor 5ss

48.1

-0.2

2.8

68.1

42.7

Minor BPS

73.5

0.82

1.6

87.8

37.8

Associated Gene:

Gene:

MAST4

Ensembl Gene ID:

ENSAPLG00000020182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017740

23111963 - 23238700

126738

ENSAPLT00000032119

22940434 - 23238700

298267

ENSAPLT00000045179

22940434 - 23236373

295940

ENSAPLT00000004141

23035063 - 23236373

201311

ENSAPLT00000031225

23130837 - 23238700

107864

ENSAPLT00000035376

22940434 - 23240930

300497

ENSAPLT00000027183

23106396 - 23236373

129978

ENSAPLT00000035260

23035063 - 23238700

203638

ENSAPLT00000019142

22999545 - 23238700

239156

ENSAPLT00000032575