Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23202233 - 23210501

Intron Length:

8269

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TGGACTTCTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGGAC

U12 Branch Point Sequence:

CCCTTTTGGACT

Flanking Amino Acid:

TIKLISNGAYGAVYFVRHKE

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

83.1

30.9

Major BPS

61.5

0.29

1.4

63.1

44.5

Major PPT

73.7

0.53

69.9

41.3

Minor 5ss

31.5

-2.1

2.7

41.5

Minor BPS

49.6

0.05

1.5

62.14

42.8

Associated Gene:

Gene:

MAST4

Ensembl Gene ID:

ENSAPLG00000020182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019142

22999545 - 23238700

239156

ENSAPLT00000032575

22999545 - 23238700

239156

ENSAPLT00000017740

23111963 - 23238700

126738

ENSAPLT00000032119

22940434 - 23238700

298267

ENSAPLT00000045179

22940434 - 23236373

295940

ENSAPLT00000004141

23035063 - 23236373

201311

ENSAPLT00000031225

23130837 - 23238700

107864

ENSAPLT00000035376

22940434 - 23240930

300497

ENSAPLT00000027183

23106396 - 23236373

129978

ENSAPLT00000035260

23035063 - 23238700

203638

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23202233_23210501_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: