Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23210711 - 23211411

Intron Length:

701

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTGT

5'SS Class:

strong_major

3'SS Sequence:

CCTGTTTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TCATCTGGAACA

Flanking Amino Acid:

HLCMVMEYVEGGDCATLMKN

Intron Amino Acid Position:

471

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

72.8

39.1

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

77.3

0.61

0.8

71.6

Minor 5ss

37.8

-1.4

3.5

55.9

48.3

Minor BPS

49.3

-0

2.1

64.69

41.9

Associated Gene:

Gene:

MAST4

Ensembl Gene ID:

ENSAPLG00000020182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004141

23035063 - 23236373

201311

ENSAPLT00000031225

23130837 - 23238700

107864

ENSAPLT00000035376

22940434 - 23240930

300497

ENSAPLT00000027183

23106396 - 23236373

129978

ENSAPLT00000035260

23035063 - 23238700

203638

ENSAPLT00000019142

22999545 - 23238700

239156

ENSAPLT00000032575

22999545 - 23238700

239156

ENSAPLT00000017740

23111963 - 23238700

126738

ENSAPLT00000032119

22940434 - 23238700

298267

ENSAPLT00000045179

22940434 - 23236373

295940

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23210711_23211411_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: