Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23211551 - 23212554

Intron Length:

1004

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTCTAATTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATCACAGTAACT

Flanking Amino Acid:

GIVHRDLKPDNLLVTSMGHI

Intron Amino Acid Position:

517

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

0.9

82.5

29.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

84.1

0.77

0.8

81.3

Minor 5ss

47.1

-0.3

2.5

59.7

39.1

Minor BPS

48.7

-0

2.3

72.39

44.1

Associated Gene:

Gene:

MAST4

Ensembl Gene ID:

ENSAPLG00000020182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032119

22940434 - 23238700

298267

ENSAPLT00000045179

22940434 - 23236373

295940

ENSAPLT00000017740

23111963 - 23238700

126738

ENSAPLT00000031225

23130837 - 23238700

107864

ENSAPLT00000035376

22940434 - 23240930

300497

ENSAPLT00000004141

23035063 - 23236373

201311

ENSAPLT00000027183

23106396 - 23236373

129978

ENSAPLT00000035260

23035063 - 23238700

203638

ENSAPLT00000019142

22999545 - 23238700

239156

ENSAPLT00000032575