Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23212688 - 23213366

Intron Length:

679

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGACAC

5'SS Class:

major

3'SS Sequence:

TCTTTTGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAC

U12 Branch Point Sequence:

TCATGCTTATTT

Flanking Amino Acid:

KDAREFLDKQVCGTPEYIAP

Intron Amino Acid Position:

562

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

68.8

36.3

Major BPS

0.5

0.9

61.4

35.9

Major PPT

85.1

0.79

0.8

84.6

30.4

Minor 5ss

-1.8

3.1

43.1

Minor BPS

53.6

0.19

72.25

45.1

Associated Gene:

Gene:

MAST4

Ensembl Gene ID:

ENSAPLG00000020182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027183

23106396 - 23236373

129978

ENSAPLT00000035260

23035063 - 23238700

203638

ENSAPLT00000019142

22999545 - 23238700

239156

ENSAPLT00000032575

22999545 - 23238700

239156

ENSAPLT00000017740

23111963 - 23238700

126738

ENSAPLT00000032119

22940434 - 23238700

298267

ENSAPLT00000045179

22940434 - 23236373

295940

ENSAPLT00000004141

23035063 - 23236373

201311

ENSAPLT00000031225

23130837 - 23238700

107864

ENSAPLT00000035376

22940434 - 23240930

300497

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23212688_23213366_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: