Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23213533 - 23216461

Intron Length:

2929

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGGATC

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTTCGCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

AATTAAATAATA

Flanking Amino Acid:

PEELFGQVISDEINWPEKDE

Intron Amino Acid Position:

617

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

0.9

74.7

35.1

Major BPS

73.8

0.59

0.9

26.8

Major PPT

74.8

0.56

70.2

41.3

Minor 5ss

31.5

-2.1

3.2

39.8

40.4

Minor BPS

47.4

-0.2

62.83

36.4

Associated Gene:

Gene:

MAST4

Ensembl Gene ID:

ENSAPLG00000020182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027183

23106396 - 23236373

129978

ENSAPLT00000035260

23035063 - 23238700

203638

ENSAPLT00000019142

22999545 - 23238700

239156

ENSAPLT00000032575

22999545 - 23238700

239156

ENSAPLT00000017740

23111963 - 23238700

126738

ENSAPLT00000032119

22940434 - 23238700

298267

ENSAPLT00000045179

22940434 - 23236373

295940

ENSAPLT00000004141

23035063 - 23236373

201311

ENSAPLT00000031225

23130837 - 23238700

107864

ENSAPLT00000035376

22940434 - 23240930

300497

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23213533_23216461_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: