Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23216564 - 23219485

Intron Length:

2922

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGGAGA

5'SS Class:

major

3'SS Sequence:

CTGGCTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTGTTGTCATTT

Flanking Amino Acid:

RQNPLERLGTGGAYEVKQHQ

Intron Amino Acid Position:

651

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.2

70.8

40.9

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

67.6

0.4

0.9

58.1

38.5

Minor 5ss

-2.5

2.8

32.1

41.9

Minor BPS

44.3

-0.3

2.3

67.09

44.5

Associated Gene:

Gene:

MAST4

Ensembl Gene ID:

ENSAPLG00000020182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004141

23035063 - 23236373

201311

ENSAPLT00000031225

23130837 - 23238700

107864

ENSAPLT00000035376

22940434 - 23240930

300497

ENSAPLT00000027183

23106396 - 23236373

129978

ENSAPLT00000035260

23035063 - 23238700

203638

ENSAPLT00000019142

22999545 - 23238700

239156

ENSAPLT00000032575

22999545 - 23238700

239156

ENSAPLT00000017740

23111963 - 23238700

126738

ENSAPLT00000032119

22940434 - 23238700

298267

ENSAPLT00000045179

22940434 - 23236373

295940

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23216564_23219485_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: