Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23219609 - 23219836

Intron Length:

228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAGGTATT

5'SS Class:

major

3'SS Sequence:

CACTTGTCTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

ATTCAAATAATT

Flanking Amino Acid:

ESEDDTSYFDTRSEKYHHME

Intron Amino Acid Position:

692

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.1

77.3

37.6

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

71.4

0.48

0.9

65.5

35.8

Minor 5ss

42.1

-0.9

3.2

61.1

38.7

Minor BPS

47.5

-0.1

71.77

38.3

Associated Gene:

Gene:

MAST4

Ensembl Gene ID:

ENSAPLG00000020182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035376

22940434 - 23240930

300497

ENSAPLT00000004141

23035063 - 23236373

201311

ENSAPLT00000031225

23130837 - 23238700

107864

ENSAPLT00000035260

23035063 - 23238700

203638

ENSAPLT00000027183

23106396 - 23236373

129978

ENSAPLT00000019142

22999545 - 23238700

239156

ENSAPLT00000032575

22999545 - 23238700

239156

ENSAPLT00000045179

22940434 - 23236373

295940

ENSAPLT00000017740

23111963 - 23238700

126738

ENSAPLT00000032119

22940434 - 23238700

298267

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23219609_23219836_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: