Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23222006 - 23222099

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTTTGCTTATTT

Flanking Amino Acid:

SLSWSSEYSEIQQISTSTSS

Intron Amino Acid Position:

772

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

80.1

34.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

87.3

0.84

0.8

82.3

33.4

Minor 5ss

37.5

-1.4

2.8

41.7

Minor BPS

59.8

0.39

80.47

41.8

Associated Gene:

Gene:

MAST4

Ensembl Gene ID:

ENSAPLG00000020182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027183

23106396 - 23236373

129978

ENSAPLT00000035260

23035063 - 23238700

203638

ENSAPLT00000019142

22999545 - 23238700

239156

ENSAPLT00000032575

22999545 - 23238700

239156

ENSAPLT00000017740

23111963 - 23238700

126738

ENSAPLT00000032119

22940434 - 23238700

298267

ENSAPLT00000045179

22940434 - 23236373

295940

ENSAPLT00000004141

23035063 - 23236373

201311

ENSAPLT00000031225

23130837 - 23238700

107864

ENSAPLT00000035376

22940434 - 23240930

300497

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23222006_23222099_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: