Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23222333 - 23224079

Intron Length:

1747

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTCAG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTGTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTACTCAACA

Flanking Amino Acid:

ASTISSSTLSVGSFSEHLDQ

Intron Amino Acid Position:

850

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

70.7

41.1

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

83.4

0.75

0.9

79.2

32.9

Minor 5ss

33.6

-1.9

2.9

45.3

Minor BPS

0.69

1.7

85.21

33.8

Associated Gene:

Gene:

MAST4

Ensembl Gene ID:

ENSAPLG00000020182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027183

23106396 - 23236373

129978

ENSAPLT00000035260

23035063 - 23238700

203638

ENSAPLT00000019142

22999545 - 23238700

239156

ENSAPLT00000032575

22999545 - 23238700

239156

ENSAPLT00000017740

23111963 - 23238700

126738

ENSAPLT00000032119

22940434 - 23238700

298267

ENSAPLT00000045179

22940434 - 23236373

295940

ENSAPLT00000004141

23035063 - 23236373

201311

ENSAPLT00000031225

23130837 - 23238700

107864

ENSAPLT00000035376

22940434 - 23240930

300497

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23222333_23224079_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: