Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23224281 - 23227126

Intron Length:

2846

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGAGATA

5'SS Class:

major

3'SS Sequence:

TTTTTTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

GTATTCTCATAG

Flanking Amino Acid:

ASALSLMIPGDVFGVSPLGS

Intron Amino Acid Position:

917

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.1

39.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

95.5

1.02

0.5

88.9

28.1

Minor 5ss

33.8

-1.8

3.6

47.6

48.1

Minor BPS

45.2

-0.5

1.9

50.54

Associated Gene:

Gene:

MAST4

Ensembl Gene ID:

ENSAPLG00000020182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032119

22940434 - 23238700

298267

ENSAPLT00000045179

22940434 - 23236373

295940

ENSAPLT00000017740

23111963 - 23238700

126738

ENSAPLT00000031225

23130837 - 23238700

107864

ENSAPLT00000035376

22940434 - 23240930

300497

ENSAPLT00000004141

23035063 - 23236373

201311

ENSAPLT00000027183

23106396 - 23236373

129978

ENSAPLT00000035260

23035063 - 23238700

203638

ENSAPLT00000019142

22999545 - 23238700

239156

ENSAPLT00000032575