Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23227357 - 23229656

Intron Length:

2300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

CTATGATTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAA

U12 Branch Point Sequence:

TTTTCTCCATCT

Flanking Amino Acid:

DIYTVHHIVWNVEEGGAAHQ

Intron Amino Acid Position:

994

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

80.2

30.6

Major BPS

67.7

0.44

58.3

38.4

Major PPT

71.5

0.48

0.9

62.6

43.2

Minor 5ss

39.1

-1.2

2.8

40.8

45.4

Minor BPS

51.2

0.12

2.1

80.99

40.7

Associated Gene:

Gene:

MAST4

Ensembl Gene ID:

ENSAPLG00000020182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027183

23106396 - 23236373

129978

ENSAPLT00000035260

23035063 - 23238700

203638

ENSAPLT00000019142

22999545 - 23238700

239156

ENSAPLT00000032575

22999545 - 23238700

239156

ENSAPLT00000017740

23111963 - 23238700

126738

ENSAPLT00000032119

22940434 - 23238700

298267

ENSAPLT00000045179

22940434 - 23236373

295940

ENSAPLT00000004141

23035063 - 23236373

201311

ENSAPLT00000031225

23130837 - 23238700

107864

ENSAPLT00000035376

22940434 - 23240930

300497

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23227357_23229656_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: