Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23231596 - 23232456

Intron Length:

861

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

CTAATCTCATTC

Flanking Amino Acid:

SYRSTPDFPSGTNSSQSSSP

Intron Amino Acid Position:

1141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.8

79.3

28.9

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

87.6

0.85

0.6

84.2

23.7

Minor 5ss

-2.2

3.2

36.8

41.9

Minor BPS

44.9

-0.4

1.7

51.57

39.8

Associated Gene:

Gene:

MAST4

Ensembl Gene ID:

ENSAPLG00000020182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027183

23106396 - 23236373

129978

ENSAPLT00000035260

23035063 - 23238700

203638

ENSAPLT00000019142

22999545 - 23238700

239156

ENSAPLT00000032575

22999545 - 23238700

239156

ENSAPLT00000017740

23111963 - 23238700

126738

ENSAPLT00000032119

22940434 - 23238700

298267

ENSAPLT00000045179

22940434 - 23236373

295940

ENSAPLT00000004141

23035063 - 23236373

201311

ENSAPLT00000031225

23130837 - 23238700

107864

ENSAPLT00000035376

22940434 - 23240930

300497

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23231596_23232456_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: