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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23404015_23406492_F

Intron Information:

Intron Rank:

138317

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

23404015 - 23406492

Intron Length:

2478

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTTCT

5'SS Class:

major

3'SS Sequence:

GAAAATGTCCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GCCTTTTTAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

33.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

54.6

0.1

1.1

42.9

46.6

Minor 5ss

-0.1

2.4

68.6

Minor BPS

0.14

1.4

54.54

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023220

23403709 - 23409125

5417