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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23406690_23408098_F

Intron Information:

Intron Rank:

138318

Intron Class:

major

Intron Phase:

Intron Coordinates:

23406690 - 23408098

Intron Length:

1409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

TTTTTTTTTATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

78.6

28.9

Major BPS

76.3

0.65

67.3

39.3

Major PPT

94.7

1.01

0.5

91.9

19.2

Minor 5ss

30.7

-2.2

3.3

40.8

45.7

Minor BPS

66.5

0.51

1.5

77.98

32.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023220

23403709 - 23409125

5417