Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23540201_23540630_R

Intron Information:

Intron Rank:

137580

Intron Class:

major

Intron Phase:

Intron Coordinates:

23540201 - 23540630

Intron Length:

430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTATGAATT

5'SS Class:

major

3'SS Sequence:

CTTTCTGCATCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

ATTTCCTGACTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

32.6

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

75.1

0.57

0.9

74.3

35.2

Minor 5ss

47.2

-0.3

2.9

Minor BPS

61.8

0.35

1.7

73.7

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033710

23539144 - 23541366

2223