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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_2374796_2569754_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
2374796 - 2569754

Intron Length:
194959

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAGTTGAC

5'SS Class:
major

3'SS Sequence:
TTTGTTCCAGAAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTTTAT

U12 Branch Point Sequence:
ATCTCTTTATTT

Flanking Amino Acid:
VKPADSESRGDRKLFVGMLN

Intron Amino Acid Position:
104

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.6
0.6
1.1
68.6
36.7

Major BPS
83.9
0.84
1
73.9
41.3

Major PPT
67.1
0.39
1.1
69.8
35.7

Minor 5ss
31.7
-2.1
3.4
43
44.6

Minor BPS
64.9
0.55
1.6
77.64
39.7

Associated Gene:

Gene:
CELF4

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2272327 - 2590923
318597

2270219 - 2590923
320705