Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23848899_23848987_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23848899 - 23848987

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGCGTGCC

5'SS Class:

major

3'SS Sequence:

GGCTCCCTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

GGCGCGCTGACG

Flanking Amino Acid:

EVTVNIPFLIRLREQLKQQL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

60.8

38.5

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

73.3

0.52

0.9

65.5

36.1

Minor 5ss

27.9

-2.5

3.2

Minor BPS

38.8

-1

2.3

40.64

43.5

Associated Gene:

Gene:

CENPH

Ensembl Gene ID:

ENSAPLG00000021827

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019083

23848463 - 23854642

6180