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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23852916_23854084_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

23852916 - 23854084

Intron Length:

1169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

AATAATGGAACAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TACTTTTTAATG

Flanking Amino Acid:

KVNAIRRKRLILRQAEEDKL

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

69.1

35.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

50.7

0.02

1.2

43.7

45.5

Minor 5ss

35.2

-1.7

3.2

47.2

42.3

Minor BPS

0.37

1.3

63.33

39.5

Associated Gene:

Gene:

CENPH

Ensembl Gene ID:

ENSAPLG00000021827

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019083

23848463 - 23854642

6180