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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23860037_23861206_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23860037 - 23861206

Intron Length:

1170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CATTTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TTAACCTTATAT

Flanking Amino Acid:

NTNQIVAIKKIKLGNRSEAK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

0.72

78.4

31.2

Major PPT

87.1

0.84

0.7

84.7

29.7

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

61.7

0.44

1.8

79.46

41.8

Associated Gene:

Gene:

CDK7

Ensembl Gene ID:

ENSAPLG00000005769

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040414

23859795 - 23886697

26903

ENSAPLT00000028301

23859795 - 23886697

26903

ENSAPLT00000005987

23859795 - 23878166

18372