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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23861241_23863007_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23861241 - 23863007

Intron Length:

1767

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCAATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTGTCAATG

Flanking Amino Acid:

KLGNRSEAKDGINRTALREI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

72.6

0.51

0.9

67.9

37.8

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

50.6

-0.1

2.3

66.82

41.6

Associated Gene:

Gene:

CDK7

Ensembl Gene ID:

ENSAPLG00000005769

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040414

23859795 - 23886697

26903

ENSAPLT00000028301

23859795 - 23886697

26903

ENSAPLT00000005987

23859795 - 23878166

18372