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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23864630_23866202_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23864630 - 23866202

Intron Length:

1573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATTA

5'SS Class:

strong_major

3'SS Sequence:

TAACACTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

ATCAATTTAACA

Flanking Amino Acid:

VFDFMETDLEVIIKDSSIVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.7

86.9

22.8

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

73.1

0.52

65.3

40.3

Minor 5ss

41.5

-0.9

3.1

48.2

Minor BPS

60.1

0.31

1.5

67.42

38.8

Associated Gene:

Gene:

CDK7

Ensembl Gene ID:

ENSAPLG00000005769

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040414

23859795 - 23886697

26903

ENSAPLT00000005987

23859795 - 23878166

18372