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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23866314_23867449_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23866314 - 23867449

Intron Length:

1136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCATG

5'SS Class:

strong_major

3'SS Sequence:

TCTAAACTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TCTTTCTAAACT

Flanking Amino Acid:

YLHQHWILHRDLKPNNLLLD

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

72.7

44.5

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

64.3

0.32

1.1

58.1

41.9

Minor 5ss

42.6

-0.8

2.9

49.5

46.5

Minor BPS

72.6

0.79

1.6

86.99

39.2

Associated Gene:

Gene:

CDK7

Ensembl Gene ID:

ENSAPLG00000005769

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040414

23859795 - 23886697

26903

ENSAPLT00000005987

23859795 - 23878166

18372