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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23867569_23868567_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23867569 - 23868567

Intron Length:

999

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TTTTTCCTAATT

Flanking Amino Acid:

NRVYTHQVVTRWYRAPELLF

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.9

78.6

37.2

Major BPS

81.9

0.79

0.9

80.1

Major PPT

97.2

1.06

0.5

96.4

12.2

Minor 5ss

32.4

-2

3.4

46.7

48.6

Minor BPS

74.5

0.85

1.6

92.26

Associated Gene:

Gene:

CDK7

Ensembl Gene ID:

ENSAPLG00000005769

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028301

23859795 - 23886697

26903

ENSAPLT00000005987

23859795 - 23878166

18372

ENSAPLT00000040414

23859795 - 23886697

26903