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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23873617_23874685_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

23873617 - 23874685

Intron Length:

1069

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCATAT

5'SS Class:

weak_major

3'SS Sequence:

CGTTATCATTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TCTTCCGTTATC

Flanking Amino Acid:

NPCARVTATQALKQKYFSNR

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.2

70.3

36.4

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

62.2

0.27

1.1

64.9

40.4

Minor 5ss

54.4

0.15

2.6

73.4

43.4

Minor BPS

0.05

2.3

70.08

Associated Gene:

Gene:

CDK7

Ensembl Gene ID:

ENSAPLG00000005769

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005987

23859795 - 23878166

18372

ENSAPLT00000040414

23859795 - 23886697

26903

ENSAPLT00000028301

23859795 - 23886697

26903