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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23889667_23901145_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23889667 - 23901145

Intron Length:

11479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGGCG

5'SS Class:

major

3'SS Sequence:

TCTTCCTCTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATGAT

U12 Branch Point Sequence:

TGATGATAGAGT

Flanking Amino Acid:

MSAPCCAGQLACCCGTAAC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

64.1

39.3

Major BPS

69.5

0.48

1.2

59.7

46.7

Major PPT

85.4

0.8

0.7

77.3

31.4

Minor 5ss

28.1

-2.5

3.6

47.1

Minor BPS

38.8

-0.8

2.4

57.52

45.1

Associated Gene:

Gene:

SERINC5

Ensembl Gene ID:

ENSAPLG00000005798

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006027

23889640 - 23922462

32823